Bgee, a gene expression database

Performance / Execution Time

Started at: 2025-02-04 19:16:59 UTC
Finished at: 2025-02-04 19:18:19 UTC

It takes 25.924 seconds (average) to obtain distinct classes.

Elapsed time0.246 [s]
RequestMethod
POST
URL
https://www.bgee.org/sparql
Headers
User-Agent: Umaka-Crawler/1.0.0 by DBCLS (umakadata@dbcls.jp)
Accept: application/sparql-results+json, application/sparql-results+xml, text/boolean, text/tab-separated-values;q=0.8, text/csv;q=0.2, */*;q=0.1
Content-Type: application/x-www-form-urlencoded
Body
query=ASK+WHERE+%7B+%3Fs+%3Fp+%3Fo+.+%7D
ResponseURL
https://www.bgee.org/sparql
Status
200
Headers
Date: Tue, 04 Feb 2025 19:17:00 GMT
Server: Virtuoso/07.20.3240 (Linux) x86_64-pc-linux-gnu
Strict-Transport-Security: max-age=63072000; includeSubDomains
Accept-Ranges: bytes
Tcn: choice
Vary: negotiate,accept
Content-Location: sparql
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Content-Disposition: filename=sparql_2025-02-04_19-17-00Z.json
Content-Type: application/sparql-results+json
Content-Length: 43
X-Frame-Options: DENY
X-Content-Type-Options: nosniff
X-Xss-Protection: 1; mode=block
Access-Control-Allow-Origin: *
Cache-Control: no-cache
Keep-Alive: timeout=5, max=97
Connection: Keep-Alive
Body
{  "head": { "link": [] }, "boolean": true}
Elapsed time26.232 [s]
RequestMethod
POST
URL
https://www.bgee.org/sparql
Headers
User-Agent: Umaka-Crawler/1.0.0 by DBCLS (umakadata@dbcls.jp)
Accept: application/sparql-results+json, application/sparql-results+xml, text/boolean, text/tab-separated-values;q=0.8, text/csv;q=0.2, */*;q=0.1
Content-Type: application/x-www-form-urlencoded
Body
query=SELECT+DISTINCT+%3Fc+WHERE+%7B+GRAPH+%3Fg+%7B+%5B%5D+a+%3Fc+.+%7D+%7D+OFFSET+0+LIMIT+100
ResponseURL
https://www.bgee.org/sparql
Status
200
Headers
Date: Tue, 04 Feb 2025 19:17:26 GMT
Server: Virtuoso/07.20.3240 (Linux) x86_64-pc-linux-gnu
Strict-Transport-Security: max-age=63072000; includeSubDomains
Accept-Ranges: bytes
Tcn: choice
Vary: negotiate,accept
Content-Location: sparql
Alternates: {"/bgee_sd_metadata.ttl" 1.000000 {type text/turtle}}, {"sparql" 1.000000 {type (NULL)}}
Content-Disposition: filename=sparql_2025-02-04_19-17-26Z.json
Content-Type: application/sparql-results+json
Content-Length: 5677
X-Frame-Options: DENY
X-Content-Type-Options: nosniff
X-Xss-Protection: 1; mode=block
Access-Control-Allow-Origin: *
Cache-Control: no-cache
Keep-Alive: timeout=5, max=96
Connection: Keep-Alive
Body

{ "head": { "link": [], "vars": ["c"] },
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    { "c": { "type": "uri", "value": "http://www.openlinksw.com/schemas/virtrdf#QuadMapFormat" }},
    { "c": { "type": "uri", "value": "http://www.openlinksw.com/schemas/virtrdf#QuadStorage" }},
    { "c": { "type": "uri", "value": "http://www.openlinksw.com/schemas/virtrdf#array-of-QuadMapFormat" }},
    { "c": { "type": "uri", "value": "http://www.openlinksw.com/schemas/virtrdf#QuadMapValue" }},
    { "c": { "type": "uri", "value": "http://www.openlinksw.com/schemas/virtrdf#array-of-QuadMapColumn" }},
    { "c": { "type": "uri", "value": "http://www.openlinksw.com/schemas/virtrdf#QuadMapColumn" }},
    { "c": { "type": "uri", "value": "http://www.openlinksw.com/schemas/virtrdf#array-of-QuadMapATable" }},
    { "c": { "type": "uri", "value": "http://www.openlinksw.com/schemas/virtrdf#QuadMapATable" }},
    { "c": { "type": "uri", "value": "http://www.openlinksw.com/schemas/virtrdf#QuadMapFText" }},
    { "c": { "type": "uri", "value": "http://www.openlinksw.com/schemas/virtrdf#array-of-string" }},
    { "c": { "type": "uri", "value": "http://www.openlinksw.com/schemas/virtrdf#array-of-QuadMap" }},
    { "c": { "type": "uri", "value": "http://www.w3.org/2002/07/owl#FunctionalProperty" }},
    { "c": { "type": "uri", "value": "http://www.w3.org/1999/02/22-rdf-syntax-ns#Property" }},
    { "c": { "type": "uri", "value": "http://www.w3.org/2002/07/owl#Class" }},
    { "c": { "type": "uri", "value": "http://www.w3.org/2002/07/owl#Ontology" }},
    { "c": { "type": "uri", "value": "http://www.w3.org/2000/01/rdf-schema#Class" }},
    { "c": { "type": "uri", "value": "http://www.w3.org/2002/07/owl#OntologyProperty" }},
    { "c": { "type": "uri", "value": "http://www.w3.org/2002/07/owl#AnnotationProperty" }},
    { "c": { "type": "uri", "value": "http://www.w3.org/1999/02/22-rdf-syntax-ns#List" }},
    { "c": { "type": "uri", "value": "http://www.w3.org/2002/07/owl#Restriction" }},
    { "c": { "type": "uri", "value": "http://www.w3.org/2002/07/owl#ObjectProperty" }},
    { "c": { "type": "uri", "value": "http://www.w3.org/2002/07/owl#DatatypeProperty" }},
    { "c": { "type": "uri", "value": "http://www.w3.org/ns/sparql-service-description#Service" }},
    { "c": { "type": "uri", "value": "http://purl.obolibrary.org/obo/CARO_0000000" }},
    { "c": { "type": "uri", "value": "http://purl.obolibrary.org/obo/CARO_0030000" }},
    { "c": { "type": "uri", "value": "http://purl.obolibrary.org/obo/CDAO_0000140" }},
    { "c": { "type": "uri", "value": "http://purl.org/genex#AnatomicalEntity" }},
    { "c": { "type": "uri", "value": "http://purl.obolibrary.org/obo/BFO_0000001" }},
    { "c": { "type": "uri", "value": "http://purl.obolibrary.org/obo/BFO_0000002" }},
    { "c": { "type": "uri", "value": "http://www.ebi.ac.uk/efo/EFO_0000635" }},
    { "c": { "type": "uri", "value": "http://www.ifomis.org/bfo/1.1/snap#MaterialEntity" }},
    { "c": { "type": "uri", "value": "http://www.ifomis.org/bfo/1.1/span#ProcessualEntity" }},
    { "c": { "type": "uri", "value": "http://purl.obolibrary.org/obo/OBI_0000181" }},
    { "c": { "type": "uri", "value": "http://www.ebi.ac.uk/efo/EFO_0000001" }},
    { "c": { "type": "uri", "value": "http://www.ebi.ac.uk/efo/EFO_0000399" }},
    { "c": { "type": "uri", "value": "http://www.ebi.ac.uk/efo/EFO_0005135" }},
    { "c": { "type": "uri", "value": "http://purl.obolibrary.org/obo/NCIT_C14250" }},
    { "c": { "type": "uri", "value": "http://purl.obolibrary.org/obo/BFO_0000004" }},
    { "c": { "type": "uri", "value": "http://www.w3.org/ns/shacl#SPARQLExecutable" }},
    { "c": { "type": "uri", "value": "http://www.w3.org/ns/shacl#SPARQLSelectExecutable" }},
    { "c": { "type": "uri", "value": "http://purl.org/dc/terms/Agent" }},
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    { "c": { "type": "uri", "value": "http://purl.org/net/orth#Organism" }},
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    { "c": { "type": "uri", "value": "http://purl.org/query/voidext#SharedInstanceSet" }},
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    { "c": { "type": "uri", "value": "http://rdfs.org/ns/void#Dataset" }},
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Elapsed time0.245 [s]
RequestMethod
POST
URL
https://www.bgee.org/sparql
Headers
User-Agent: Umaka-Crawler/1.0.0 by DBCLS (umakadata@dbcls.jp)
Accept: application/sparql-results+json, application/sparql-results+xml, text/boolean, text/tab-separated-values;q=0.8, text/csv;q=0.2, */*;q=0.1
Content-Type: application/x-www-form-urlencoded
Body
query=ASK+WHERE+%7B+%3Fs+%3Fp+%3Fo+.+%7D
ResponseURL
https://www.bgee.org/sparql
Status
200
Headers
Date: Tue, 04 Feb 2025 19:17:26 GMT
Server: Virtuoso/07.20.3240 (Linux) x86_64-pc-linux-gnu
Strict-Transport-Security: max-age=63072000; includeSubDomains
Accept-Ranges: bytes
Tcn: choice
Vary: negotiate,accept
Content-Location: sparql
Alternates: {"/bgee_sd_metadata.ttl" 1.000000 {type text/turtle}}, {"sparql" 1.000000 {type (NULL)}}
Content-Disposition: filename=sparql_2025-02-04_19-17-26Z.json
Content-Type: application/sparql-results+json
Content-Length: 43
X-Frame-Options: DENY
X-Content-Type-Options: nosniff
X-Xss-Protection: 1; mode=block
Access-Control-Allow-Origin: *
Cache-Control: no-cache
Keep-Alive: timeout=5, max=95
Connection: Keep-Alive
Body
{  "head": { "link": [] }, "boolean": true}
Elapsed time26.093 [s]
RequestMethod
POST
URL
https://www.bgee.org/sparql
Headers
User-Agent: Umaka-Crawler/1.0.0 by DBCLS (umakadata@dbcls.jp)
Accept: application/sparql-results+json, application/sparql-results+xml, text/boolean, text/tab-separated-values;q=0.8, text/csv;q=0.2, */*;q=0.1
Content-Type: application/x-www-form-urlencoded
Body
query=SELECT+DISTINCT+%3Fc+WHERE+%7B+GRAPH+%3Fg+%7B+%5B%5D+a+%3Fc+.+%7D+%7D+OFFSET+100+LIMIT+100
ResponseURL
https://www.bgee.org/sparql
Status
200
Headers
Date: Tue, 04 Feb 2025 19:17:52 GMT
Server: Virtuoso/07.20.3240 (Linux) x86_64-pc-linux-gnu
Strict-Transport-Security: max-age=63072000; includeSubDomains
Accept-Ranges: bytes
Tcn: choice
Vary: negotiate,accept
Content-Location: sparql
Alternates: {"/bgee_sd_metadata.ttl" 1.000000 {type text/turtle}}, {"sparql" 1.000000 {type (NULL)}}
Content-Disposition: filename=sparql_2025-02-04_19-17-52Z.json
Content-Type: application/sparql-results+json
Content-Length: 112
X-Frame-Options: DENY
X-Content-Type-Options: nosniff
X-Xss-Protection: 1; mode=block
Access-Control-Allow-Origin: *
Cache-Control: no-cache
Keep-Alive: timeout=5, max=94
Connection: Keep-Alive
Body

{ "head": { "link": [], "vars": ["c"] },
  "results": { "distinct": false, "ordered": true, "bindings": [ ] } }
Elapsed time0.244 [s]
RequestMethod
POST
URL
https://www.bgee.org/sparql
Headers
User-Agent: Umaka-Crawler/1.0.0 by DBCLS (umakadata@dbcls.jp)
Accept: application/sparql-results+json, application/sparql-results+xml, text/boolean, text/tab-separated-values;q=0.8, text/csv;q=0.2, */*;q=0.1
Content-Type: application/x-www-form-urlencoded
Body
query=ASK+WHERE+%7B+%3Fs+%3Fp+%3Fo+.+%7D
ResponseURL
https://www.bgee.org/sparql
Status
200
Headers
Date: Tue, 04 Feb 2025 19:17:52 GMT
Server: Virtuoso/07.20.3240 (Linux) x86_64-pc-linux-gnu
Strict-Transport-Security: max-age=63072000; includeSubDomains
Accept-Ranges: bytes
Tcn: choice
Vary: negotiate,accept
Content-Location: sparql
Alternates: {"/bgee_sd_metadata.ttl" 1.000000 {type text/turtle}}, {"sparql" 1.000000 {type (NULL)}}
Content-Disposition: filename=sparql_2025-02-04_19-17-52Z.json
Content-Type: application/sparql-results+json
Content-Length: 43
X-Frame-Options: DENY
X-Content-Type-Options: nosniff
X-Xss-Protection: 1; mode=block
Access-Control-Allow-Origin: *
Cache-Control: no-cache
Keep-Alive: timeout=5, max=93
Connection: Keep-Alive
Body
{  "head": { "link": [] }, "boolean": true}
Elapsed time26.183 [s]
RequestMethod
POST
URL
https://www.bgee.org/sparql
Headers
User-Agent: Umaka-Crawler/1.0.0 by DBCLS (umakadata@dbcls.jp)
Accept: application/sparql-results+json, application/sparql-results+xml, text/boolean, text/tab-separated-values;q=0.8, text/csv;q=0.2, */*;q=0.1
Content-Type: application/x-www-form-urlencoded
Body
query=SELECT+DISTINCT+%3Fc+WHERE+%7B+GRAPH+%3Fg+%7B+%5B%5D+a+%3Fc+.+%7D+%7D+OFFSET+200+LIMIT+100
ResponseURL
https://www.bgee.org/sparql
Status
200
Headers
Date: Tue, 04 Feb 2025 19:18:19 GMT
Server: Virtuoso/07.20.3240 (Linux) x86_64-pc-linux-gnu
Strict-Transport-Security: max-age=63072000; includeSubDomains
Accept-Ranges: bytes
Tcn: choice
Vary: negotiate,accept
Content-Location: sparql
Alternates: {"/bgee_sd_metadata.ttl" 1.000000 {type text/turtle}}, {"sparql" 1.000000 {type (NULL)}}
Content-Disposition: filename=sparql_2025-02-04_19-18-19Z.json
Content-Type: application/sparql-results+json
Content-Length: 112
X-Frame-Options: DENY
X-Content-Type-Options: nosniff
X-Xss-Protection: 1; mode=block
Access-Control-Allow-Origin: *
Cache-Control: no-cache
Keep-Alive: timeout=5, max=92
Connection: Keep-Alive
Body

{ "head": { "link": [], "vars": ["c"] },
  "results": { "distinct": false, "ordered": true, "bindings": [ ] } }