Endpoint Search

You can search endpoints using REST API. Please see this document for more details.

Rank
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Attributes
NameURLScore
IDSM ChemWebRDFhttps://idsm.elixir-czech.cz/sparql/endpoint/idsm98
Alliehttps://data.allie.dbcls.jp/sparql97
WikiPathwayshttps://sparql.wikipathways.org/sparql95
Rheahttps://sparql.rhea-db.org/sparql94
SwissLipidshttps://beta.sparql.swisslipids.org/93
UniProthttps://sparql.uniprot.org/92
Protein Ontologyhttps://sparql.proconsortium.org/virtuoso/sparql91
Bgee, a gene expression databasehttps://www.bgee.org/sparql83
AOP-Wiki SPARQL endpointhttps://aopwiki.rdf.bigcat-bioinformatics.org/sparql83
OMA Orthology databasehttps://sparql.omabrowser.org/sparql80
Life Science Dictionaryhttp://lsd.dbcls.jp/sparql79
Wikidatahttps://query.wikidata.org/sparql79
Health IT Ontologyhttps://hitontology.eu/sparql78
HAMAPhttps://hamap.expasy.org/sparql/74
RDF Portal PubChemhttps://rdfportal.org/pubchem/sparql74
Medical Subject Headings (MeSH) RDF Linked Datahttps://id.nlm.nih.gov/mesh/sparql73
NBDC NikkajiRDF (RDF Portal)https://rdfportal.org/primary/sparql73
RDF Portal SIBhttps://rdfportal.org/sib/sparql72
FirstAuthor Navigationhttp://navi.first.lifesciencedb.jp/fanavi/sparql72
MetaNetXhttps://rdf.metanetx.org/sparql72
GlyCosmoshttps://ts.glycosmos.org/sparql72
polyadenylation-sites-in-magnaporthe-oryzahttps://dydra.com/markw/polyadenylation-sites-in-magnaporthe-oryza/sparql70
GLIC SPARQL endpointhttps://sparql.glycoinfo.org/sparql69
Bio2RDFhttps://bio2rdf.org/sparql69
RDF Portal Wikidatahttps://rdfportal.org/wikidata/sparql68
RDF Portal PDBhttps://rdfportal.org/pdb/sparql68
RDF Portal DDBJhttps://rdfportal.org/ddbj/sparql68
RDF Portal KEROhttps://rdfportal.org/kero/sparql68
RDF Portal EBIhttps://rdfportal.org/ebi/sparql68
RDF Portal NCBIhttps://rdfportal.org/ncbi/sparql68
LinkDBhttp://www.genome.jp/sparql/linkdb68
GlyConnect RDFhttps://glyconnect.expasy.org/sparql67
RDF Portal Bioportalhttps://rdfportal.org/bioportal/sparql66
OBO/OntoBeehttp://sparql.hegroup.org/sparql/65
Regulatory circuits LODhttps://regulatorycircuits-lod.genouest.org/sparql/64
FORUM Knowledge graph Databasehttps://forum.semantic-metabolomics.fr/sparql/63
GlycoNAVIhttps://sparql.glyconavi.org/sparql63
COXPRESdbhttps://coxpresdb.jp/sparql62
LIPID MAPS®https://lipidmaps.org/sparql61
IDEALhttps://ideal-rdf.dbcls.jp/sparql61
IMGT-KGhttps://www.imgt.org/fuseki/ImgtKg/sparql61
Plant Metabolic Pathways Wikihttps://plantmetwiki.bioinformatics.nl/sparql61
RIKEN MetaDatabasehttp://metadb.riken.jp/sparql60
BioResource MetaDatabasehttps://knowledge.brc.riken.jp/sparql60
ChEBIhttps://idsm.elixir-czech.cz/sparql/endpoint/chebi59
BRENDAhttps://sparql.dsmz.de/api/brenda57
BacDivehttps://sparql.dsmz.de/api/bacdive57
KGAPhttps://api.data.pldn.nl/datasets/FilipiSoares/AgriPrices-1/sparql57
AGROVOChttps://agrovoc.fao.org/sparql56
MediaDivehttps://sparql.dsmz.de/api/mediadive56
STRINGhttps://sparql.string-db.org/53
ATTED-IIhttps://atted.jp/sparql50
RDF Portal Human Protein Atlashttps://rdfportal.org/proteinatlas/sparql41
neXtProthttps://sparql.nextprot.org/36
GlyTouCanhttps://ts.glytoucan.org/sparql33
BioGatewayhttps://2407.biogateway.eu/sparql/19
OrthoDB @ sib.swisshttp://sparql.orthodb.org/sparql14
Colilhttp://colil.dbcls.jp/sparql12
A SPARQL Explorer for ChEMBL RDF SPARQL Endpoint (mirror)https://chemblmirror.rdf.bigcat-bioinformatics.org/sparql8
GlyGenhttp://sparql.glygen.org:8880/sparql5
Agronomic Linked Data (AgroLD)http://sparql.southgreen.fr/5
PDBj-BMRBhttps://bmrbpub.pdbj.org/search/rdf5