Bgee, a gene expression database

Usefulness / Support for Turtle Data Format

Started at: 2024-08-29 19:32:31 UTC
Finished at: 2024-08-29 19:32:33 UTC

The endpoint does not support content negotiation for text/turtle

Elapsed time8.853 [s]
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POST
URL
https://www.bgee.org/sparql
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Date: Thu, 29 Aug 2024 19:11:10 GMT
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{ "head": { "link": [], "vars": ["s"] },
  "results": { "distinct": false, "ordered": true, "bindings": [
    { "s": { "type": "uri", "value": "http://bgee.org/#EXPRESSION_CONDITION_145184" }} ] } }
Elapsed time1.215 [s]
RequestMethod
GET
URL
http://bgee.org/
Headers
User-Agent: Umaka-Crawler/1.0.0 by DBCLS (umakadata@dbcls.jp)
Accept: text/turtle
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Date: Thu, 29 Aug 2024 19:32:32 GMT
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<!doctype html><html lang="en" xmlns="http://www.w3.org/1999/xhtml" prefix="schema: https://schemas.org/
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Elapsed time0.517 [s]
RequestMethod
POST
URL
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{ "head": { "link": [], "vars": ["s"] },
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    { "s": { "type": "uri", "value": "http://omabrowser.org/ontology/oma#GENE_ENSACAG00000003283" }} ] } }
Elapsed time1.696 [s]
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<?xml version="1.0"?>
<rdf:RDF xmlns="http://purl.org/net/orth#"
     xml:base="http://purl.org/net/orth"
     xmlns:schema="http://schema.org/"
     xmlns:mbgd="http://mbgd.genome.ad.jp/owl/mbgd#"
     xmlns:oma="http://omabrowser.org/ontology/oma#"
     xmlns:owl="http://www.w3.org/2002/07/owl#"
     xmlns:xsd="http://www.w3.org/2001/XMLSchema#"
     xmlns:rdfs="http://www.w3.org/2000/01/rdf-schema#"
     xmlns:so-xp="http://purl.obolibrary.org/obo/so-xp.obo#"
     xmlns:ncbi="http://miuras.inf.um.es/ontologies/swit/ncbi.owl#"
     xmlns:cito="http://purl.org/spar/cito/"
     xmlns:biositemap="http://bioontology.org/ontologies/biositemap.owl#"
     xmlns:dct="http://purl.org/dc/terms/"
     xmlns:xml="http://www.w3.org/XML/1998/namespace"
     xmlns:sio="http://semanticscience.org/resource/"
     xmlns:taxon="http://www.uniprot.org/taxonomy/"
     xmlns:up="http://purl.uniprot.org/core/"
     xmlns:so="http://purl.obolibrary.org/obo/so#"
     xmlns:vann="http://purl.org/vocab/vann/"
     xmlns:foaf="http://xmlns.com/foaf/0.1/"
     xmlns:void="http://rdfs.org/ns/void#"
     xmlns:pav="http://purl.org/pav#"
     xmlns:oboInOwl="http://www.geneontology.org/formats/oboInOwl#"
     xmlns:go="http://purl.obolibrary.org/obo/go#"
     xmlns:upuniprot="http://purl.uniprot.org/uniprot/"
     xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#"
     xmlns:obo="http://purl.obolibrary.org/obo/"
     xmlns:dc="http://purl.org/dc/elements/1.1/"
     xmlns:subsets="http://purl.obolibrary.org/obo/ro/subsets#">
    <owl:Ontology rdf:about="http://omabrowser.org/ontology/oma"/>
    


    <!-- 
    ///////////////////////////////////////////////////////////////////////////////////////
    //
    // Annotation properties
    //
    ///////////////////////////////////////////////////////////////////////////////////////
     -->

    


    <!-- http://purl.org/dc/elements/1.1/identifier -->

    <owl:AnnotationProperty rdf:about="http://purl.org/dc/elements/1.1/identifier"/>
    


    <!-- http://purl.org/dc/terms/description -->

    <owl:AnnotationProperty rdf:about="http://purl.org/dc/terms/description"/>
    


    <!-- http://www.w3.org/2000/01/rdf-schema#description -->

    <owl:AnnotationProperty rdf:about="http://www.w3.org/2000/01/rdf-schema#description"/>
    


    <!-- 
    ///////////////////////////////////////////////////////////////////////////////////////
    //
    // Object Properties
    //
    ///////////////////////////////////////////////////////////////////////////////////////
     -->

    


    <!-- http://bioontology.org/ontologies/biositemap.owl#version_information -->

    <owl:ObjectProperty rdf:about="http://bioontology.org/ontologies/biositemap.owl#version_information">
        <rdfs:label xml:lang="en">version information</rdfs:label>
    </owl:ObjectProperty>
    


    <!-- http://omabrowser.org/ontology/oma#altSpliceVariant -->

    <owl:ObjectProperty rdf:about="http://omabrowser.org/ontology/oma#altSpliceVariant">
        <rdf:type rdf:resource="http://www.w3.org/2002/07/owl#SymmetricProperty"/>
        <rdfs:domain rdf:resource="http://purl.org/net/orth#Protein"/>
        <rdfs:range rdf:resource="http://purl.org/net/orth#Protein"/>
    </owl:ObjectProperty>
    


    <!-- http://omabrowser.org/ontology/oma#belongsToHOG -->

    <owl:ObjectProperty rdf:about="http://omabrowser.org/ontology/oma#belongsToHOG">
        <rdfs:subPropertyOf rdf:resource="http://purl.obolibrary.org/obo/CDAO_0000190"/>
        <rdfs:domain>
            <owl:Class>
                <owl:unionOf rdf:parseType="Collection">
                    <rdf:Description rdf:about="http://purl.org/net/orth#Gene"/>
                    <rdf:Description rdf:about="http://purl.org/net/orth#Protein"/>
                </owl:unionOf>
            </owl:Class>
        </rdfs:domain>
        <rdfs:range>
            <owl:Class>
                <owl:unionOf rdf:parseType="Collection">
                    <rdf:Description rdf:about="http://purl.org/net/orth#Gene"/>
                    <rdf:Description rdf:about="http://purl.org/net/orth#OrthologsCluster"/>
                    <rdf:Description rdf:about="http://purl.org/net/orth#Protein"/>
                </owl:unionOf>
            </owl:Class>
        </rdfs:range>
    </owl:ObjectProperty>
    


    <!-- http://omabrowser.org/ontology/oma#belongsToOMAGroup -->

    <owl:ObjectProperty rdf:about="http://omabrowser.org/ontology/oma#belongsToOMAGroup">
        <rdfs:subPropertyOf rdf:resource="http://purl.obolibrary.org/obo/CDAO_0000190"/>
        <rdfs:domain rdf:resource="http://purl.org/net/orth#Protein"/>
        <rdfs:range rdf:resource="http://omabrowser.org/ontology/oma#OMAGroup"/>
    </owl:ObjectProperty>
    


    <!-- http://omabrowser.org/ontology/oma#crossReference -->

    <owl:ObjectProperty rdf:about="http://omabrowser.org/ontology/oma#crossReference">
        <rdfs:domain rdf:resource="http://www.w3.org/2002/07/owl#Thing"/>
        <rdfs:range rdf:resource="http://www.w3.org/2002/07/owl#Thing"/>
    </owl:ObjectProperty>
    


    <!-- http://omabrowser.org/ontology/oma#domain -->

    <owl:ObjectProperty rdf:about="http://omabrowser.org/ontology/oma#domain">
        <rdfs:subPropertyOf rdf:resource="http://purl.obolibrary.org/obo/so_has_part"/>
        <rdfs:subPropertyOf rdf:resource="http://purl.org/dc/terms/hasPart"/>
        <rdfs:subPropertyOf rdf:resource="http://semanticscience.org/resource/SIO_000974"/>
        <rdfs:domain>
            <owl:Class>
                <owl:unionOf rdf:parseType="Collection">
                    <rdf:Description rdf:about="http://purl.org/net/orth#Gene"/>
                    <rdf:Description rdf:about="http://purl.org/net/orth#Protein"/>
                </owl:unionOf>
            </owl:Class>
        </rdfs:domain>
        <rdfs:range rdf:resource="http://mbgd.genome.ad.jp/owl/mbgd#Domain"/>
        <rdfs:isDefinedBy rdf:resource="http://omabrowser.org/ontology/oma"/>
        <rdfs:label>domain</rdfs:label>
        <owl:versionInfo xml:lang="en">The current version defines (Protein U Gene) as domain of this property instead of only Gene (it is the case of mbgd:domain).</owl:versionInfo>
    </owl:ObjectProperty>
    


    <!-- http://omabrowser.org/ontology/oma#hasEvidenceCode -->

    <owl:ObjectProperty rdf:about="http://omabrowser.org/ontology/oma#hasEvidenceCode">
        <rdfs:subPropertyOf rdf:resource="http://purl.obolibrary.org/obo/CDAO_0000178"/>
        <rdfs:domain>
            <owl:Class>
                <owl:unionOf rdf:parseType="Collection">
                    <rdf:Description rdf:about="http://purl.obolibrary.org/obo/GO_0003674"/>
                    <rdf:Description rdf:about="http://purl.obolibrary.org/obo/GO_0005575"/>
                    <rdf:Description rdf:about="http://purl.obolibrary.org/obo/GO_0008150"/>
                </owl:unionOf>
            </owl:Class>
        </rdfs:domain>
        <rdfs:range rdf:resource="http://omabrowser.org/ontology/oma#EvidenceCode"/>
    </owl:ObjectProperty>
    


    <!-- http://omabrowser.org/ontology/oma#hasGOAnnotation -->

    <owl:ObjectProperty rdf:about="http://omabrowser.org/ontology/oma#hasGOAnnotation">
        <rdfs:subPropertyOf rdf:resource="http://purl.obolibrary.org/obo/CDAO_0000178"/>
        <rdfs:domain>
            <owl:Class>
                <owl:unionOf rdf:parseType="Collection">
                    <rdf:Description rdf:about="http://purl.org/net/orth#Gene"/>
                    <rdf:Description rdf:about="http://purl.org/net/orth#Protein"/>
                </owl:unionOf>
            </owl:Class>
        </rdfs:domain>
        <rdfs:range>
            <owl:Class>
                <owl:unionOf rdf:parseType="Collection">
                    <rdf:Description rdf:about="http://purl.obolibrary.org/obo/GO_0003674"/>
                    <rdf:Description rdf:about="http://purl.obolibrary.org/obo/GO_0005575"/>
                    <rdf:Description rdf:about="http://purl.obolibrary.org/obo/GO_0008150"/>
                </owl:unionOf>
            </owl:Class>
        </rdfs:range>
    </owl:ObjectProperty>
    


    <!-- http://omabrowser.org/ontology/oma#hasOrtholog -->

    <owl:ObjectProperty rdf:about="http://omabrowser.org/ontology/oma#hasOrtholog">
        <rdfs:subPropertyOf rdf:resource="http://purl.obolibrary.org/obo/CDAO_0000178"/>
        <rdfs:domain>
            <owl:Class>
                <owl:unionOf rdf:parseType="Collection">
                    <rdf:Description rdf:about="http://purl.org/net/orth#Gene"/>
                    <rdf:Description rdf:about="http://purl.org/net/orth#Protein"/>
                </owl:unionOf>
            </owl:Class>
        </rdfs:domain>
        <rdfs:range>
            <owl:Class>
                <owl:unionOf rdf:parseType="Collection">
                    <rdf:Description rdf:about="http://purl.org/net/orth#Gene"/>
                    <rdf:Description rdf:about="http://purl.org/net/orth#Protein"/>
                </owl:unionOf>
            </owl:Class>
        </rdfs:range>
    </owl:ObjectProperty>
    


    <!-- http://omabrowser.org/ontology/oma#hasParalog -->

    <owl:ObjectProperty rdf:about="http://omabrowser.org/ontology/oma#hasParalog">
        <rdfs:subPropertyOf rdf:resource="http://purl.obolibrary.org/obo/CDAO_0000178"/>
        <rdfs:domain>
            <owl:Class>
                <owl:unionOf rdf:parseType="Collection">
                    <rdf:Description rdf:about="http://purl.org/net/orth#Gene"/>
                    <rdf:Description rdf:about="http://purl.org/net/orth#Protein"/>
                </owl:unionOf>
            </owl:Class>
        </rdfs:domain>
        <rdfs:range>
            <owl:Class>
                <owl:unionOf rdf:parseType="Collection">
                    <rdf:Description rdf:about="http://purl.org/net/orth#Gene"/>
                    <rdf:Description rdf:about="http://purl.org/net/orth#Protein"/>
                </owl:unionOf>
            </owl:Class>
        </rdfs:range>
    </owl:ObjectProperty>
    


    <!-- http://omabrowser.org/ontology/oma#hasParent -->

    <owl:ObjectProperty rdf:about="http://omabrowser.org/ontology/oma#hasParent">
        <rdfs:subPropertyOf…
[Trailing bodies are truncated]
Elapsed time1273.545 [s]
RequestMethod
POST
URL
https://www.bgee.org/sparql
Headers
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