GlycoNAVI

Performance / Execution Time

Started at: 2024-06-08 02:35:50 UTC
Finished at: 2024-06-08 02:35:58 UTC

It takes 2.481 seconds (average) to obtain distinct classes.

ASK WHERE { ?s ?p ?o . } took 0.015 seconds.

Elapsed time		0.015 [s]
Request	Method	`POST`
	URL	`https://sparql.glyconavi.org/sparql`
	Headers	`User-Agent: Umaka-Crawler/1.0.0 by DBCLS (umakadata@dbcls.jp) Accept: application/sparql-results+json, application/sparql-results+xml, text/boolean, text/tab-separated-values;q=0.8, text/csv;q=0.2, /;q=0.1 Content-Type: application/x-www-form-urlencoded`
	Body	`query=ASK+WHERE+%7B+%3Fs+%3Fp+%3Fo+.+%7D`
Response	URL	`https://sparql.glyconavi.org/sparql`
	Status	`200`
	Headers	`Accept-Ranges: bytes Alt-Svc: h3=":443"; ma=2592000 Content-Type: application/sparql-results+json Date: Sat, 08 Jun 2024 02:35:50 GMT Server: Caddy, Virtuoso/07.20.3217 (Linux) x86_64-unknown-linux-gnu Transfer-Encoding: chunked`
	Body	`{ "head": { "link": [] }, "boolean": true}`

SELECT DISTINCT ?c WHERE { GRAPH ?g { [] a ?c . } } OFFSET 0 LIMIT 100 took 0.377 seconds.

Elapsed time		0.377 [s]
Request	Method	`POST`
	URL	`https://sparql.glyconavi.org/sparql`
	Headers	`User-Agent: Umaka-Crawler/1.0.0 by DBCLS (umakadata@dbcls.jp) Accept: application/sparql-results+json, application/sparql-results+xml, text/boolean, text/tab-separated-values;q=0.8, text/csv;q=0.2, /;q=0.1 Content-Type: application/x-www-form-urlencoded`
	Body	`query=SELECT+DISTINCT+%3Fc+WHERE+%7B+GRAPH+%3Fg+%7B+%5B%5D+a+%3Fc+.+%7D+%7D+OFFSET+0+LIMIT+100`
Response	URL	`https://sparql.glyconavi.org/sparql`
	Status	`200`
	Headers	`Accept-Ranges: bytes Alt-Svc: h3=":443"; ma=2592000 Content-Type: application/sparql-results+json Date: Sat, 08 Jun 2024 02:35:51 GMT Server: Caddy, Virtuoso/07.20.3217 (Linux) x86_64-unknown-linux-gnu Transfer-Encoding: chunked`
	Body	{ "head": { "link": [], "vars": ["c"] }, "results": { "distinct": false, "ordered": true, "bindings": [ { "c": { "type": "uri", "value": "http://www.openlinksw.com/schemas/virtrdf#QuadMapFormat" }}, { "c": { "type": "uri", "value": "http://www.openlinksw.com/schemas/virtrdf#QuadStorage" }}, { "c": { "type": "uri", "value": "http://www.openlinksw.com/schemas/virtrdf#array-of-QuadMap" }}, { "c": { "type": "uri", "value": "http://www.openlinksw.com/schemas/virtrdf#QuadMap" }}, { "c": { "type": "uri", "value": "http://www.openlinksw.com/schemas/virtrdf#array-of-QuadMapFormat" }}, { "c": { "type": "uri", "value": "http://www.openlinksw.com/schemas/virtrdf#QuadMapValue" }}, { "c": { "type": "uri", "value": "http://www.openlinksw.com/schemas/virtrdf#array-of-QuadMapATable" }}, { "c": { "type": "uri", "value": "http://www.openlinksw.com/schemas/virtrdf#array-of-QuadMapColumn" }}, { "c": { "type": "uri", "value": "http://www.openlinksw.com/schemas/virtrdf#QuadMapColumn" }}, { "c": { "type": "uri", "value": "http://www.openlinksw.com/schemas/virtrdf#QuadMapFText" }}, { "c": { "type": "uri", "value": "http://www.openlinksw.com/schemas/virtrdf#QuadMapATable" }}, { "c": { "type": "uri", "value": "http://www.openlinksw.com/schemas/virtrdf#array-of-string" }}, { "c": { "type": "uri", "value": "http://www.w3.org/ns/sparql-service-description#Service" }}, { "c": { "type": "uri", "value": "http://www.w3.org/2002/07/owl#AnnotationProperty" }}, { "c": { "type": "uri", "value": "http://glyconavi.org/glyabun/BioResource" }}, { "c": { "type": "uri", "value": "http://semanticscience.org/resource/SIO_010497" }}, { "c": { "type": "uri", "value": "http://purl.jp/bio/12/glyco/glycan#resource_entry" }}, { "c": { "type": "uri", "value": "http://glyconavi.org/glyabun/ResourceComponent" }}, { "c": { "type": "uri", "value": "http://purl.jp/bio/12/glyco/glycan#Glycoprotein" }}, { "c": { "type": "uri", "value": "http://glyconavi.org/glyabun/Abundance" }}, { "c": { "type": "uri", "value": "http://purl.jp/bio/12/glyco/glycan#Glycoform" }}, { "c": { "type": "uri", "value": "http://glyconavi.org/glyabun/Glycoform_Information" }}, { "c": { "type": "uri", "value": "http://glyconavi.org/glyabun/RelativeAbundance" }}, { "c": { "type": "uri", "value": "http://semanticscience.org/resource/SIO_001018" }}, { "c": { "type": "uri", "value": "http://glyconavi.org/glyabun/ExactRatio" }}, { "c": { "type": "uri", "value": "http://semanticscience.org/resource/submolecular-entity" }}, { "c": { "type": "uri", "value": "http://biohackathon.org/resource/faldo#Region" }}, { "c": { "type": "uri", "value": "http://purl.jp/bio/12/glyco/glycan#Glycosylation_site" }}, { "c": { "type": "uri", "value": "http://biohackathon.org/resource/faldo#ExactPosition" }}, { "c": { "type": "uri", "value": "http://glyconavi.org/glyabun/AuthorPosition" }}, { "c": { "type": "uri", "value": "http://glyconavi.org/glycosample/Glycosample" }}, { "c": { "type": "uri", "value": "http://purl.jp/bio/12/glyco/glycan#ReferencedProtein" }}, { "c": { "type": "uri", "value": "http://purl.jp/bio/12/glyco/glycan#ReferencedSaccharide" }}, { "c": { "type": "uri", "value": "http://purl.jp/bio/12/glyco/glycan#RelativeAbundance" }}, { "c": { "type": "uri", "value": "http://purl.jp/bio/12/glyco/glycan#Saccharide" }}, { "c": { "type": "uri", "value": "http://identifiers.org/glyconavi/GN_GlyTouCan" }}, { "c": { "type": "uri", "value": "http://purl.jp/bio/12/glyco/glycan#Citation" }}, { "c": { "type": "uri", "value": "http://purl.uniprot.org/core/Protein" }}, { "c": { "type": "uri", "value": "http://www.w3.org/2002/07/owl#Class" }}, { "c": { "type": "uri", "value": "http://semanticscience.org/resource/SIO_010072" }}, { "c": { "type": "uri", "value": "http://rdf.ebi.ac.uk/terms/chembl#WikipediaMolRef" }}, { "c": { "type": "uri", "value": "http://rdf.ebi.ac.uk/terms/chembl#SmallMolecule" }}, { "c": { "type": "uri", "value": "http://rdf.ebi.ac.uk/terms/chembl#ProteinMolecule" }}, { "c": { "type": "uri", "value": "http://rdf.ebi.ac.uk/terms/chembl#UnknownSubstance" }}, { "c": { "type": "uri", "value": "http://xmlns.com/foaf/0.1/Image" }}, { "c": { "type": "uri", "value": "http://semanticscience.org/resource/CHEMINF_000308" }}, { "c": { "type": "uri", "value": "http://semanticscience.org/resource/CHEMINF_000310" }}, { "c": { "type": "uri", "value": "http://semanticscience.org/resource/CHEMINF_000309" }}, { "c": { "type": "uri", "value": "http://semanticscience.org/resource/CHEMINF_000300" }}, { "c": { "type": "uri", "value": "http://semanticscience.org/resource/CHEMINF_000321" }}, { "c": { "type": "uri", "value": "http://semanticscience.org/resource/CHEMINF_000326" }}, { "c": { "type": "uri", "value": "http://semanticscience.org/resource/CHEMINF_000324" }}, { "c": { "type": "uri", "value": "http://semanticscience.org/resource/CHEMINF_000311" }}, { "c": { "type": "uri", "value": "http://semanticscience.org/resource/CHEMINF_000381" }}, { "c": { "type": "uri", "value": "http://semanticscience.org/resource/CHEMINF_000317" }}, { "c": { "type": "uri", "value": "http://semanticscience.org/resource/CHEMINF_000350" }}, { "c": { "type": "uri", "value": "http://semanticscience.org/resource/CHEMINF_000042" }}, { "c": { "type": "uri", "value": "http://semanticscience.org/resource/CHEMINF_000312" }}, { "c": { "type": "uri", "value": "http://semanticscience.org/resource/CHEMINF_000323" }}, { "c": { "type": "uri", "value": "http://semanticscience.org/resource/CHEMINF_000198" }}, { "c": { "type": "uri", "value": "http://semanticscience.org/resource/CHEMINF_000325" }}, { "c": { "type": "uri", "value": "http://semanticscience.org/resource/CHEMINF_000430" }}, { "c": { "type": "uri", "value": "http://semanticscience.org/resource/CHEMINF_000218" }}, { "c": { "type": "uri", "value": "http://semanticscience.org/resource/CHEMINF_000431" }}, { "c": { "type": "uri", "value": "http://semanticscience.org/resource/CHEMINF_000305" }}, { "c": { "type": "uri", "value": "http://semanticscience.org/resource/CHEMINF_000018" }}, { "c": { "type": "uri", "value": "http://semanticscience.org/resource/CHEMINF_000113" }}, { "c": { "type": "uri", "value": "http://semanticscience.org/resource/CHEMINF_000059" }}, { "c": { "type": "uri", "value": "http://rdf.ebi.ac.uk/terms/chembl#Antibody" }}, { "c": { "type": "uri", "value": "http://rdf.ebi.ac.uk/terms/chembl#Enzyme" }}, { "c": { "type": "uri", "value": "http://rdf.ebi.ac.uk/terms/chembl#Oligonucleotide" }}, { "c": { "type": "uri", "value": "http://rdf.ebi.ac.uk/terms/chembl#Oligosaccharide" }}, { "c": { "type": "uri", "value": "http://glyconavi.org/ontology/pdb#TCarpEntry" }}, { "c": { "type": "uri", "value": "http://glyconavi.org/ontology/pdb#PDBModelGlycan" }}, { "c": { "type": "uri", "value": "http://glyconavi.org/ontology/pdb#PDBModel" }}, { "c": { "type": "uri", "value": "http://glyconavi.org/ontology/pdb#PDBAtomList" }}, { "c": { "type": "uri", "value": "http://glyconavi.org/ontology/pdb#Interaction" }}, { "c": { "type": "uri", "value": "http://glyconavi.org/ontology/pdb#SoftwareInfo" }}, { "c": { "type": "uri", "value": "http://glyconavi.org/ontology/pdb#PolypeptideL" }}, { "c": { "type": "uri", "value": "http://glyconavi.org/ontology/pdb#AtomSiteValidation" }}, { "c": { "type": "uri", "value": "https://rdf.wwpdb.org/schema/pdbx-v50.owl#atom_site" }}, { "c": { "type": "uri", "value": "https://rdf.wwpdb.org/schema/pdbx-v50.owl#citation" }}, { "c": { "type": "uri", "value": "https://rdf.wwpdb.org/schema/pdbx-v50.owl#entity_src_nat" }}, { "c": { "type": "uri", "value": "https://rdf.wwpdb.org/schema/pdbx-v50.owl#exptl" }}, { "c": { "type": "uri", "value": "https://rdf.wwpdb.org/schema/pdbx-v50.owl#struct" }}, { "c": { "type": "uri", "value": "https://rdf.wwpdb.org/schema/pdbx-v50.owl#struct_conf" }}, { "c": { "type": "uri", "value": "https://rdf.wwpdb.org/schema/pdbx-v50.owl#struct_ref" }}, { "c": { "type": "uri", "value": "http://glyconavi.org/ontology/pdb#BranchEntry" }}, { "c": { "type": "uri", "value": "http://glyconavi.org/ontology/pdb#BranchEntryValidation" }}, { "c": { "type": "uri", "value": "https://rdf.wwpdb.org/schema/pdbx-v50.owl#pdbx_entity_branch_link" }}, { "c": { "type": "uri", "value": "https://rdf.wwpdb.org/schema/pdbx-v50.owl#pdbx_entity_branch_list" }}, { "c": { "type": "uri", "value": "https://rdf.wwpdb.org/schema/pdbx-v50.owl#struct_sheet_range" }}, { "c": { "type": "uri", "value": "http://glyconavi.org/ontology/pdb#GlycosylationSite" }}, { "c": { "type": "uri", "value": "https://rdf.wwpdb.org/schema/pdbx-v50.owl#struct_conn" }}, { "c": { "type": "uri", "value": "http://glyconavi.org/ontology/pdb#WURCSStandard" }}, { "c": { "type": "uri", "value": "http://purl.jp/bio/12/glyco/glycan#Glycosequence" }}, { "c": { "type": "uri", "value": "http://glyconavi.org/ontology/pdb#Polyribonucleotide" }}, { "c": { "type": "uri", "value": "http://glyconavi.org/ontology/pdb#Polydeoxyribonucleotide" }}, { "c": { "type": "uri", "value": "http://glyconavi.org/ontology/pdb#WURCSWithAglycone" }}, { "c": { "type": "uri", "value": "http://glyconavi.org/ontology/pdb#SeparatedWURCSWithAglycone" }} ] } }

ASK WHERE { ?s ?p ?o . } took 0.013 seconds.

Elapsed time		0.013 [s]
Request	Method	`POST`
	URL	`https://sparql.glyconavi.org/sparql`
	Headers	`User-Agent: Umaka-Crawler/1.0.0 by DBCLS (umakadata@dbcls.jp) Accept: application/sparql-results+json, application/sparql-results+xml, text/boolean, text/tab-separated-values;q=0.8, text/csv;q=0.2, /;q=0.1 Content-Type: application/x-www-form-urlencoded`
	Body	`query=ASK+WHERE+%7B+%3Fs+%3Fp+%3Fo+.+%7D`
Response	URL	`https://sparql.glyconavi.org/sparql`
	Status	`200`
	Headers	`Accept-Ranges: bytes Alt-Svc: h3=":443"; ma=2592000 Content-Type: application/sparql-results+json Date: Sat, 08 Jun 2024 02:35:51 GMT Server: Caddy, Virtuoso/07.20.3217 (Linux) x86_64-unknown-linux-gnu Transfer-Encoding: chunked`
	Body	`{ "head": { "link": [] }, "boolean": true}`

SELECT DISTINCT ?c WHERE { GRAPH ?g { [] a ?c . } } OFFSET 100 LIMIT 100 took 0.44 seconds.

Elapsed time		0.44 [s]
Request	Method	`POST`
	URL	`https://sparql.glyconavi.org/sparql`
	Headers	`User-Agent: Umaka-Crawler/1.0.0 by DBCLS (umakadata@dbcls.jp) Accept: application/sparql-results+json, application/sparql-results+xml, text/boolean, text/tab-separated-values;q=0.8, text/csv;q=0.2, /;q=0.1 Content-Type: application/x-www-form-urlencoded`
	Body	`query=SELECT+DISTINCT+%3Fc+WHERE+%7B+GRAPH+%3Fg+%7B+%5B%5D+a+%3Fc+.+%7D+%7D+OFFSET+100+LIMIT+100`
Response	URL	`https://sparql.glyconavi.org/sparql`
	Status	`200`
	Headers	`Accept-Ranges: bytes Alt-Svc: h3=":443"; ma=2592000 Content-Type: application/sparql-results+json Date: Sat, 08 Jun 2024 02:35:51 GMT Server: Caddy, Virtuoso/07.20.3217 (Linux) x86_64-unknown-linux-gnu Transfer-Encoding: chunked`
	Body	{ "head": { "link": [], "vars": ["c"] }, "results": { "distinct": false, "ordered": true, "bindings": [ { "c": { "type": "uri", "value": "http://glyconavi.org/ontology/pdb#PolypeptideD" }}, { "c": { "type": "uri", "value": "http://purl.uniprot.org/core/Nucleotide_Resource" }}, { "c": { "type": "uri", "value": "http://purl.uniprot.org/core/External_Sequence" }}, { "c": { "type": "uri", "value": "http://purl.uniprot.org/core/Beta_Strand_Annotation" }}, { "c": { "type": "uri", "value": "http://purl.uniprot.org/core/Disulfide_Bond_Annotation" }}, { "c": { "type": "uri", "value": "http://purl.uniprot.org/core/Domain_Extent_Annotation" }}, { "c": { "type": "uri", "value": "http://purl.uniprot.org/core/Compositional_Bias_Annotation" }}, { "c": { "type": "uri", "value": "http://purl.uniprot.org/core/Glycosylation_Annotation" }}, { "c": { "type": "uri", "value": "http://purl.uniprot.org/core/PTM_Annotation" }}, { "c": { "type": "uri", "value": "http://purl.uniprot.org/core/Repeat_Annotation" }}, { "c": { "type": "uri", "value": "http://purl.uniprot.org/core/Metal_Binding_Annotation" }}, { "c": { "type": "uri", "value": "http://purl.uniprot.org/core/Function_Annotation" }}, { "c": { "type": "uri", "value": "http://purl.uniprot.org/core/Structured_Name" }}, { "c": { "type": "uri", "value": "http://purl.uniprot.org/core/Subunit_Annotation" }}, { "c": { "type": "uri", "value": "http://purl.uniprot.org/core/Region_Annotation" }}, { "c": { "type": "uri", "value": "http://purl.uniprot.org/core/Sequence_Conflict_Annotation" }}, { "c": { "type": "uri", "value": "http://purl.uniprot.org/core/Helix_Annotation" }}, { "c": { "type": "uri", "value": "http://purl.uniprot.org/core/Turn_Annotation" }}, { "c": { "type": "uri", "value": "http://purl.uniprot.org/core/Similarity_Annotation" }}, { "c": { "type": "uri", "value": "http://purl.uniprot.org/core/Transmembrane_Annotation" }}, { "c": { "type": "uri", "value": "http://purl.uniprot.org/core/Modified_Residue_Annotation" }}, { "c": { "type": "uri", "value": "http://purl.uniprot.org/core/Topological_Domain_Annotation" }}, { "c": { "type": "uri", "value": "http://purl.uniprot.org/core/Temperature_Dependence_Annotation" }}, { "c": { "type": "uri", "value": "http://purl.uniprot.org/core/Tissue" }}, { "c": { "type": "uri", "value": "http://purl.uniprot.org/core/Subcellular_Location_Annotation" }}, { "c": { "type": "uri", "value": "http://purl.uniprot.org/core/Natural_Variant_Annotation" }}, { "c": { "type": "uri", "value": "http://purl.uniprot.org/core/Binding_Site_Annotation" }}, { "c": { "type": "uri", "value": "http://purl.uniprot.org/core/Gene" }}, { "c": { "type": "uri", "value": "http://purl.uniprot.org/core/Initiator_Methionine_Annotation" }}, { "c": { "type": "uri", "value": "http://purl.uniprot.org/core/Signal_Peptide_Annotation" }}, { "c": { "type": "uri", "value": "http://purl.uniprot.org/core/Domain_Annotation" }}, { "c": { "type": "uri", "value": "http://purl.uniprot.org/core/Cofactor_Annotation" }}, { "c": { "type": "uri", "value": "http://purl.uniprot.org/core/Catalytic_Activity_Annotation" }}, { "c": { "type": "uri", "value": "http://purl.uniprot.org/core/Resource" }}, { "c": { "type": "uri", "value": "http://purl.uniprot.org/core/Erroneous_Initiation_Annotation" }}, { "c": { "type": "uri", "value": "http://purl.uniprot.org/core/Developmental_Stage_Annotation" }}, { "c": { "type": "uri", "value": "http://purl.uniprot.org/core/Induction_Annotation" }}, { "c": { "type": "uri", "value": "http://purl.uniprot.org/core/Strain" }}, { "c": { "type": "uri", "value": "http://purl.uniprot.org/core/Active_Site_Annotation" }}, { "c": { "type": "uri", "value": "http://purl.uniprot.org/core/Catalytic_Activity" }}, { "c": { "type": "uri", "value": "http://purl.uniprot.org/core/Mutagenesis_Annotation" }}, { "c": { "type": "uri", "value": "http://purl.uniprot.org/core/Motif_Annotation" }}, { "c": { "type": "uri", "value": "http://purl.uniprot.org/core/Tissue_Specificity_Annotation" }}, { "c": { "type": "uri", "value": "http://purl.uniprot.org/core/PH_Dependence_Annotation" }}, { "c": { "type": "uri", "value": "http://purl.uniprot.org/core/Mass_Spectrometry_Annotation" }}, { "c": { "type": "uri", "value": "http://purl.uniprot.org/core/Site_Annotation" }}, { "c": { "type": "uri", "value": "http://purl.uniprot.org/core/Part" }}, { "c": { "type": "uri", "value": "http://purl.uniprot.org/core/Non-terminal_Residue_Annotation" }}, { "c": { "type": "uri", "value": "http://purl.uniprot.org/core/Caution_Annotation" }}, { "c": { "type": "uri", "value": "http://purl.uniprot.org/core/Disruption_Phenotype_Annotation" }}, { "c": { "type": "uri", "value": "http://purl.uniprot.org/core/Pathway_Annotation" }}, { "c": { "type": "uri", "value": "http://purl.uniprot.org/core/Alternative_Splicing_Annotation" }}, { "c": { "type": "uri", "value": "http://purl.uniprot.org/core/Coiled_Coil_Annotation" }}, { "c": { "type": "uri", "value": "http://purl.uniprot.org/core/Lipidation_Annotation" }}, { "c": { "type": "uri", "value": "http://purl.uniprot.org/core/Annotation" }}, { "c": { "type": "uri", "value": "http://purl.uniprot.org/core/Biotechnology_Annotation" }}, { "c": { "type": "uri", "value": "http://purl.uniprot.org/core/Erroneous_Gene_Model_Prediction_Annotation" }}, { "c": { "type": "uri", "value": "http://purl.uniprot.org/core/NP_Binding_Annotation" }}, { "c": { "type": "uri", "value": "http://purl.uniprot.org/core/Alternative_Promoter_Usage_Annotation" }}, { "c": { "type": "uri", "value": "http://purl.uniprot.org/core/Disease_Annotation" }}, { "c": { "type": "uri", "value": "http://purl.uniprot.org/core/Kinetics_Annotation" }}, { "c": { "type": "uri", "value": "http://purl.uniprot.org/core/Activity_Regulation_Annotation" }}, { "c": { "type": "uri", "value": "http://purl.uniprot.org/core/Frameshift_Annotation" }}, { "c": { "type": "uri", "value": "http://purl.uniprot.org/core/Sequence_Caution_Annotation" }}, { "c": { "type": "uri", "value": "http://purl.uniprot.org/core/Cross-link_Annotation" }}, { "c": { "type": "uri", "value": "http://purl.uniprot.org/core/Polymorphism_Annotation" }}, { "c": { "type": "uri", "value": "http://purl.uniprot.org/core/Chain_Annotation" }}, { "c": { "type": "uri", "value": "http://purl.uniprot.org/core/Propeptide_Annotation" }}, { "c": { "type": "uri", "value": "http://purl.uniprot.org/core/Peptide_Annotation" }}, { "c": { "type": "uri", "value": "http://purl.uniprot.org/core/Alternative_Sequence_Annotation" }}, { "c": { "type": "uri", "value": "http://purl.uniprot.org/core/Journal_Citation" }}, { "c": { "type": "uri", "value": "http://purl.uniprot.org/core/Submission_Citation" }}, { "c": { "type": "uri", "value": "http://purl.uniprot.org/core/Genomic_DNA" }}, { "c": { "type": "uri", "value": "http://purl.uniprot.org/core/MRNA" }}, { "c": { "type": "uri", "value": "http://purl.uniprot.org/core/Transcript_Resource" }}, { "c": { "type": "uri", "value": "http://purl.uniprot.org/core/Interaction" }}, { "c": { "type": "uri", "value": "http://purl.uniprot.org/core/Non_Self_Interaction" }}, { "c": { "type": "uri", "value": "http://purl.uniprot.org/core/Self_Interaction" }}, { "c": { "type": "uri", "value": "http://purl.uniprot.org/core/Participant" }}, { "c": { "type": "uri", "value": "http://purl.uniprot.org/core/Simple_Sequence" }}, { "c": { "type": "uri", "value": "http://purl.uniprot.org/core/Modified_Sequence" }}, { "c": { "type": "uri", "value": "http://biohackathon.org/resource/faldo#Position" }}, { "c": { "type": "uri", "value": "http://biohackathon.org/resource/faldo#InRangePosition" }}, { "c": { "type": "uri", "value": "http://purl.uniprot.org/core/Structure_Resource" }}, { "c": { "type": "uri", "value": "http://www.w3.org/1999/02/22-rdf-syntax-ns#Statement" }}, { "c": { "type": "uri", "value": "http://purl.uniprot.org/core/Citation_Statement" }}, { "c": { "type": "uri", "value": "http://purl.uniprot.org/core/Zinc_Finger_Annotation" }}, { "c": { "type": "uri", "value": "http://purl.uniprot.org/core/Erroneous_Termination_Annotation" }}, { "c": { "type": "uri", "value": "http://purl.uniprot.org/core/Intramembrane_Annotation" }}, { "c": { "type": "uri", "value": "http://purl.uniprot.org/core/Ribosomal_Frameshifting" }}, { "c": { "type": "uri", "value": "http://purl.uniprot.org/core/Toxic_Dose_Annotation" }}, { "c": { "type": "uri", "value": "http://purl.uniprot.org/core/Thesis_Citation" }}, { "c": { "type": "uri", "value": "http://purl.uniprot.org/core/Genomic_RNA" }}, { "c": { "type": "uri", "value": "http://purl.uniprot.org/core/Transcribed_RNA" }}, { "c": { "type": "uri", "value": "http://purl.uniprot.org/core/Calcium_Binding_Annotation" }}, { "c": { "type": "uri", "value": "http://purl.uniprot.org/core/Non-adjacent_Residues_Annotation" }}, { "c": { "type": "uri", "value": "http://purl.uniprot.org/core/Erroneous_Translation_Annotation" }}, { "c": { "type": "uri", "value": "http://purl.uniprot.org/core/Book_Citation" }}, { "c": { "type": "uri", "value": "http://biohackathon.org/resource/faldo#OneOfPosition" }}, { "c": { "type": "uri", "value": "http://purl.uniprot.org/core/Sequence_Uncertainty_Annotation" }} ] } }

ASK WHERE { ?s ?p ?o . } took 0.013 seconds.

Elapsed time		0.013 [s]
Request	Method	`POST`
	URL	`https://sparql.glyconavi.org/sparql`
	Headers	`User-Agent: Umaka-Crawler/1.0.0 by DBCLS (umakadata@dbcls.jp) Accept: application/sparql-results+json, application/sparql-results+xml, text/boolean, text/tab-separated-values;q=0.8, text/csv;q=0.2, /;q=0.1 Content-Type: application/x-www-form-urlencoded`
	Body	`query=ASK+WHERE+%7B+%3Fs+%3Fp+%3Fo+.+%7D`
Response	URL	`https://sparql.glyconavi.org/sparql`
	Status	`200`
	Headers	`Accept-Ranges: bytes Alt-Svc: h3=":443"; ma=2592000 Content-Type: application/sparql-results+json Date: Sat, 08 Jun 2024 02:35:51 GMT Server: Caddy, Virtuoso/07.20.3217 (Linux) x86_64-unknown-linux-gnu Transfer-Encoding: chunked`
	Body	`{ "head": { "link": [] }, "boolean": true}`

SELECT DISTINCT ?c WHERE { GRAPH ?g { [] a ?c . } } OFFSET 200 LIMIT 100 took 6.667 seconds.

Elapsed time		6.667 [s]
Request	Method	`POST`
	URL	`https://sparql.glyconavi.org/sparql`
	Headers	`User-Agent: Umaka-Crawler/1.0.0 by DBCLS (umakadata@dbcls.jp) Accept: application/sparql-results+json, application/sparql-results+xml, text/boolean, text/tab-separated-values;q=0.8, text/csv;q=0.2, /;q=0.1 Content-Type: application/x-www-form-urlencoded`
	Body	`query=SELECT+DISTINCT+%3Fc+WHERE+%7B+GRAPH+%3Fg+%7B+%5B%5D+a+%3Fc+.+%7D+%7D+OFFSET+200+LIMIT+100`
Response	URL	`https://sparql.glyconavi.org/sparql`
	Status	`200`
	Headers	`Accept-Ranges: bytes Alt-Svc: h3=":443"; ma=2592000 Content-Type: application/sparql-results+json Date: Sat, 08 Jun 2024 02:35:58 GMT Server: Caddy, Virtuoso/07.20.3217 (Linux) x86_64-unknown-linux-gnu Transfer-Encoding: chunked`
	Body	{ "head": { "link": [], "vars": ["c"] }, "results": { "distinct": false, "ordered": true, "bindings": [ { "c": { "type": "uri", "value": "http://purl.uniprot.org/core/Allergen_Annotation" }}, { "c": { "type": "uri", "value": "http://purl.uniprot.org/core/Absorption_Annotation" }}, { "c": { "type": "uri", "value": "http://purl.uniprot.org/core/RNA_Editing_Annotation" }}, { "c": { "type": "uri", "value": "http://purl.uniprot.org/core/Observation_Citation" }}, { "c": { "type": "uri", "value": "http://purl.uniprot.org/core/Other_RNA" }}, { "c": { "type": "uri", "value": "http://purl.uniprot.org/core/Unassigned_DNA" }}, { "c": { "type": "uri", "value": "http://purl.uniprot.org/core/Alternative_Initiation_Annotation" }}, { "c": { "type": "uri", "value": "http://purl.uniprot.org/core/Unknown_Sequence" }}, { "c": { "type": "uri", "value": "http://www.glycoinfo.org/glyco/owl/relation#Linkage_defined_saccharide" }}, { "c": { "type": "uri", "value": "http://www.glycoinfo.org/glyco/owl/relation#Base_composition_with_linkage" }}, { "c": { "type": "uri", "value": "http://www.glycoinfo.org/glyco/owl/relation#Glycosidic_topology" }}, { "c": { "type": "uri", "value": "http://www.glycoinfo.org/glyco/owl/relation#Base_composition" }}, { "c": { "type": "uri", "value": "http://purl.jp/bio/12/glyco/glycan#saccharide" }}, { "c": { "type": "uri", "value": "http://purl.jp/bio/12/glyco/glycan#Glycan" }}, { "c": { "type": "uri", "value": "http://glyconavi.org/glyabun/Glycans" }}, { "c": { "type": "uri", "value": "http://rdf.ebi.ac.uk/terms/chembl#CellTherapy" }}, { "c": { "type": "uri", "value": "http://semanticscience.org/resource/SIO_010341" }}, { "c": { "type": "uri", "value": "http://rdf.ebi.ac.uk/terms/chembl#UnclassifiedSubstance" }}, { "c": { "type": "uri", "value": "http://purl.jp/bio/12/glyco/sample#Sample" }}, { "c": { "type": "uri", "value": "http://purl.jp/bio/12/glyco/glyconavi#Abundance" }}, { "c": { "type": "uri", "value": "http://purl.jp/bio/12/glyco/glyconavi#Project" }}, { "c": { "type": "uri", "value": "http://purl.jp/bio/12/glyco/glyconavi#Sample" }}, { "c": { "type": "uri", "value": "http://glyconavi.org/database/chebi" }}, { "c": { "type": "uri", "value": "http://purl.jp/bio/12/glyco/glyconavi#DBLink" }}, { "c": { "type": "uri", "value": "http://glyconavi.org/database/glytoucan" }}, { "c": { "type": "uri", "value": "http://identifiers.org/glyconavi/GN_PubMed" }}, { "c": { "type": "uri", "value": "http://purl.jp/bio/12/glyco/conjugate#Relative_abundance" }}, { "c": { "type": "uri", "value": "http://semanticscience.org/resource/SIO_001258" }}, { "c": { "type": "uri", "value": "http://semanticscience.org/resource/SIO_000289" }}, { "c": { "type": "uri", "value": "http://purl.jp/bio/12/glyco/glycan#Glycosylated_AA" }}, { "c": { "type": "uri", "value": "http://biohackathon.org/resource/faldo#FuzzyPosition" }}, { "c": { "type": "uri", "value": "http://purl.jp/bio/12/glyco/glycan#Source_natural" }}, { "c": { "type": "uri", "value": "http://purl.uniprot.org/core/Taxon" }}, { "c": { "type": "uri", "value": "http://purl.jp/bio/12/glyco/glyconavi#DB_memo" }}, { "c": { "type": "uri", "value": "http://purl.glycoinfo.org/ontology/codao#CompoundDiseaseAssosiation" }}, { "c": { "type": "uri", "value": "http://purl.obolibrary.org/obo/DOID_12132" }}, { "c": { "type": "uri", "value": "http://purl.obolibrary.org/obo/DOID_1520" }}, { "c": { "type": "uri", "value": "http://purl.obolibrary.org/obo/DOID_5350" }}, { "c": { "type": "uri", "value": "http://purl.obolibrary.org/obo/DOID_10283" }}, { "c": { "type": "uri", "value": "http://biohackathon.org/resource/faldoExactPosition" }}, { "c": { "type": "uri", "value": "http://rdfs.org/ns/void#Dataset" }}, { "c": { "type": "uri", "value": "http://rdfs.org/ns/void#rootResource" }}, { "c": { "type": "uri", "value": "http://purl.jp/bio/12/glyco/glycan/glycoconjugate" }}, { "c": { "type": "uri", "value": "http://purl.jp/bio/12/glyco/glycan/aglycon" }}, { "c": { "type": "uri", "value": "http://purl.jp/bio/12/glyco/glycan/saccharide" }}, { "c": { "type": "uri", "value": "http://purl.jp/bio/12/glyco/glycan/glycosequence" }}, { "c": { "type": "uri", "value": "http://semanticscience.org/resource/CHEMINF_000109" }}, { "c": { "type": "uri", "value": "http://glycoinfo.org/ontology/glygen#Gene" }}, { "c": { "type": "uri", "value": "http://glycoinfo.org/ontology/glygen#Taxonomy" }}, { "c": { "type": "uri", "value": "http://purl.obolibrary.org/obo/DOID_2237" }}, { "c": { "type": "uri", "value": "http://purl.uniprot.org/core/Viral_cRNA" }}, { "c": { "type": "uri", "value": "http://purl.uniprot.org/core/Pharmaceutical_Annotation" }}, { "c": { "type": "uri", "value": "http://purl.uniprot.org/core/Redox_Potential_Annotation" }}, { "c": { "type": "uri", "value": "http://purl.uniprot.org/core/Transit_Peptide_Annotation" }}, { "c": { "type": "uri", "value": "http://purl.uniprot.org/core/Nucleotide_Binding_Annotation" }}, { "c": { "type": "uri", "value": "http://purl.uniprot.org/core/Electronic_Citation" }}, { "c": { "type": "uri", "value": "http://purl.uniprot.org/core/Unassigned_RNA" }}, { "c": { "type": "uri", "value": "http://identifiers.org/glyconavi/GN_CAS" }}, { "c": { "type": "uri", "value": "http://identifiers.org/glyconavi/GN_Chemspider" }}, { "c": { "type": "uri", "value": "http://identifiers.org/glyconavi/GN_DrugBank" }}, { "c": { "type": "uri", "value": "http://identifiers.org/glyconavi/GN_HMDB" }}, { "c": { "type": "uri", "value": "http://identifiers.org/glyconavi/GN_KEGG" }}, { "c": { "type": "uri", "value": "http://identifiers.org/glyconavi/GN_KNApSAcK" }}, { "c": { "type": "uri", "value": "http://identifiers.org/glyconavi/GN_LINCS" }}, { "c": { "type": "uri", "value": "http://identifiers.org/glyconavi/GN_LIPID_MAPS" }}, { "c": { "type": "uri", "value": "http://identifiers.org/glyconavi/GN_PDBeChem" }}, { "c": { "type": "uri", "value": "http://identifiers.org/glyconavi/GN_Pubchem" }}, { "c": { "type": "uri", "value": "http://identifiers.org/glyconavi/GN_Wikipedia" }}, { "c": { "type": "uri", "value": "http://identifiers.org/glyconavi/GN_PDB" }}, { "c": { "type": "uri", "value": "http://purl.jp/bio/12/natural" }}, { "c": { "type": "uri", "value": "http://www.glycoinfo.org/glyco/owl/wurcs#MOD" }}, { "c": { "type": "uri", "value": "http://www.w3.org/2002/07/owl#ObjectProperty" }}, { "c": { "type": "uri", "value": "http://glyconavi.org/glyabun/Alditol" }}, { "c": { "type": "uri", "value": "http://glyconavi.org/pdb/Ser" }}, { "c": { "type": "uri", "value": "http://glyconavi.org/pdb/Thr" }}, { "c": { "type": "uri", "value": "http://glyconavi.org/pdb/Asn" }}, { "c": { "type": "uri", "value": "http://glyconavi.org/pdb/NConsensusPattern" }}, { "c": { "type": "uri", "value": "http://glyconavi.org/pdb/DisulfideBondSite" }}, { "c": { "type": "uri", "value": "http://glyconavi.org/pdb/Asa" }}, { "c": { "type": "uri", "value": "http://glyconavi.org/pdb/NGlycosylationSite" }}, { "c": { "type": "uri", "value": "http://glyconavi.org/pdb/TorsionAngle" }}, { "c": { "type": "uri", "value": "http://glyconavi.org/pdb/OGlycosylationSite" }}, { "c": { "type": "uri", "value": "http://glyconavi.org/pdb/Distance" }}, { "c": { "type": "uri", "value": "http://xmlns.com/foaf/0.1/Person" }}, { "c": { "type": "uri", "value": "http://semanticscience.org/resource/SIO_000089" }}, { "c": { "type": "uri", "value": "http://purl.jp/bio/12/glyco/glycan#Resource_entry" }}, { "c": { "type": "uri", "value": "http://purl.jp/bio/12/glyco/glycan#glycosylated_AA" }}, { "c": { "type": "uri", "value": "http://glyconavi.org/owl#Motif" }}, { "c": { "type": "uri", "value": "http://glycoinfo.org/notation/wurcs/2.0" }}, { "c": { "type": "uri", "value": "http://purl.uniprot.org/core/Non-standard_Residue_Annotation" }}, { "c": { "type": "uri", "value": "http://www.w3.org/2002/07/owl#TransitiveProperty" }}, { "c": { "type": "uri", "value": "http://www.w3.org/2002/07/owl#Ontology" }}, { "c": { "type": "uri", "value": "http://semanticscience.org/resource/SIO_010299" }}, { "c": { "type": "uri", "value": "http://purl.obolibrary.org/obo/DOID_12449" }}, { "c": { "type": "uri", "value": "http://purl.jp/bio/12/glyco/glycan#glycosequence" }}, { "c": { "type": "uri", "value": "http://www.glycoinfo.org/glyco/owl/wurcs#LIN" }}, { "c": { "type": "uri", "value": "http://www.glycoinfo.org/glyco/owl/wurcs#RES" }}, { "c": { "type": "uri", "value": "http://www.glycoinfo.org/glyco/owl/wurcs#UniqueRES" }}, { "c": { "type": "uri", "value": "http://purl.org/dc/terms/LicenseDocument" }}, { "c": { "type": "uri", "value": "http://glyconavi.org/ontology/pdb#GlycanType" }} ] } }